Generally, nobody will report you as long as you don’t do things that should be impossible for a human, such as gathering for over 3 hours (which I admit is possible, but suspicious at the very least), or crafting in a place you think no one goes to and then not react to people talking to you. And please don’t let Miqobot run on her own. Watch her so you can react when players start interacting with you.
My personal advice? I have been botting with Miqobot way before combat assist was a thing, I still do, and when it comes to gathering: Turn the game to borderless windowed, or windowed, pull up your favorite browser and start binge watching, then make your browser small enough so you can still see the chatlog. Why? When players emote you it is usually displayed in chat, and you will obviously notice better when someone talks to you.
As for crafting, look for private areas. Some examples are the guest rooms in every main city, some rare quest related areas, and there is also the… School(?) in Ishgard. What I mean with this is that there are some areas in the game where you are given absolute privacy. Heck, you can even make privacy by buying a small house and locking the doors, then pretend that you are working on your interior the entire time.
tl;dr
Don’t wanna get caught? Hide well and watch over your helping kitty cat.
PS: Please ignore all typos if there are any. New keyboard, trying to get used to the new switches.